Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000569.1 Corchorus capsularis cultivar CVL-1 contig00569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1440

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
438--515
38
2.1
37
90
2
120
12
16
11
58
1.62
1047--1193
22
6.7
21
69
14
77
37
12
15
34
1.85
1068--1220
22
6.9
22
74
11
98
33
11
17
37
1.85
1076--1220
44
3.2
44
82
9
161
34
11
17
35
1.87
1089--1227
22
6.2
22
77
3
107
32
11
19
36
1.88
1263--1376
22
5.2
21
73
12
77
33
7
20
38
1.81

Tables:   1

The End!