Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005692.1 Corchorus capsularis cultivar CVL-1 contig05710, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3252

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--151
31
3.5
31
72
15
110
34
20
20
24
1.96
10--149
60
2.3
60
93
0
235
33
18
20
27
1.96
18--127
29
3.7
29
72
13
89
30
17
21
30
1.96
181--310
31
4.3
30
77
13
140
26
20
14
39
1.91
243--341
29
3.3
29
71
15
94
30
22
14
33
1.93
209--372
60
2.7
60
89
3
242
28
19
16
35
1.94
2641--2714
28
2.7
28
87
2
96
41
25
14
17
1.88
3111--3249
70
2.0
71
90
4
219
39
20
18
20
1.93

Tables:   1

The End!