Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005718.1 Corchorus capsularis cultivar CVL-1 contig05736, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6627

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196--296
44
2.3
45
91
3
170
36
18
7
36
1.80
302--342
21
2.0
21
90
4
66
0
24
0
75
0.80
791--1015
75
3.0
75
87
1
319
29
22
10
37
1.87
1150--1220
3
23.7
3
97
0
133
32
1
0
66
1.01
5238--5432
27
7.2
26
72
17
130
21
21
3
54
1.58
5242--5399
55
2.9
54
74
11
128
20
20
3
55
1.57
5472--5532
15
4.3
14
76
12
61
21
18
3
57
1.54
5470--5582
22
5.3
21
78
16
99
22
20
3
53
1.60
5471--5579
20
5.1
21
78
15
100
22
20
3
54
1.60

Tables:   1

The End!