Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005719.1 Corchorus capsularis cultivar CVL-1 contig05737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11500

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367--948
196
3.0
195
84
2
751
29
18
29
22
1.98
7132--7174
2
21.5
2
86
9
61
48
2
0
48
1.14
7195--7260
31
2.1
31
86
5
89
25
19
6
48
1.72
7746--7886
22
6.3
22
68
14
74
33
7
17
41
1.79
7999--8283
22
12.8
21
72
14
148
41
8
15
34
1.79
7988--8308
44
7.2
44
70
14
178
40
8
16
34
1.79
8143--8308
88
1.9
87
82
8
212
43
9
13
33
1.76
8395--8929
22
24.6
22
69
13
173
38
10
14
36
1.80
8395--8929
44
12.3
44
69
10
244
38
10
14
36
1.80
8538--8615
23
3.4
23
82
1
86
42
5
14
38
1.67
8538--8644
23
4.7
23
79
2
65
40
9
14
36
1.78
8713--8798
45
1.9
45
83
4
111
33
11
16
38
1.85
11072--11109
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!