Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005735.1 Corchorus capsularis cultivar CVL-1 contig05753, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11827

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
542--571
14
2.1
14
93
0
51
66
0
0
33
0.92
1376--1492
53
2.3
53
82
11
138
41
23
14
21
1.90
1906--1997
48
1.9
48
82
8
116
40
18
23
17
1.91
7390--7428
21
1.9
20
84
5
51
28
2
15
53
1.55
7498--11437
646
6.1
644
89
2
5398
32
15
16
35
1.90
7498--11437
324
12.2
322
89
2
5333
32
15
16
35
1.90

Tables:   1

The End!