Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005739.1 Corchorus capsularis cultivar CVL-1 contig05757, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6708

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1351--1407
30
1.9
30
92
0
96
17
29
19
33
1.95
1972--2026
17
3.2
16
80
17
58
45
0
5
49
1.25
1980--2012
15
2.1
16
88
5
50
48
0
3
48
1.17
1974--2013
16
2.4
16
88
12
55
42
0
2
55
1.13
6540--6614
33
2.3
33
90
4
116
20
40
28
12
1.87
6618--6692
32
2.3
32
86
2
105
14
36
37
12
1.83

Tables:   1

The End!