Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005754.1 Corchorus capsularis cultivar CVL-1 contig05772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9392

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4115--4214
42
2.4
42
81
8
116
35
31
6
28
1.81
4147--4216
21
3.3
21
74
6
70
38
28
8
24
1.85
4136--4214
42
1.9
42
87
7
117
35
31
7
25
1.84
5065--5135
27
2.7
26
80
8
81
14
16
26
42
1.87
6752--6791
20
2.0
20
85
0
53
45
17
5
32
1.70
8490--8551
31
2.0
31
87
3
90
14
16
17
51
1.76
8502--8570
31
2.3
30
82
12
79
15
14
18
50
1.78
9231--9275
13
3.4
14
76
11
51
48
17
17
15
1.81
9242--9281
19
2.1
19
90
0
62
55
12
17
15
1.70

Tables:   1

The End!