Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005756.1 Corchorus capsularis cultivar CVL-1 contig05774, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9716

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
216--1477
330
3.8
330
85
2
1683
32
15
17
35
1.91
563--2395
943
1.9
938
85
3
2495
32
15
17
35
1.91
1499--2909
331
4.3
329
83
5
1743
32
15
16
35
1.90
1499--2909
654
2.1
659
85
3
1858
32
15
16
35
1.90
3060--5009
328
5.8
329
81
7
2142
32
14
17
35
1.90
4758--5261
268
1.9
269
87
3
757
32
16
17
33
1.92
6613--8597
331
6.0
330
83
4
2342
32
15
16
34
1.91
8011--9432
615
2.3
607
90
1
2238
31
15
16
35
1.91

Tables:   1

The End!