Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005760.1 Corchorus capsularis cultivar CVL-1 contig05778, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10749

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3094--3164
15
5.3
14
73
25
64
53
9
0
36
1.34
3094--3164
26
2.7
26
91
0
115
53
9
0
36
1.34
3095--3204
52
2.1
52
81
6
125
56
10
0
32
1.39
7740--7770
2
15.5
2
100
0
62
51
0
0
48
1.00
8230--8257
2
14.0
2
100
0
56
50
0
0
50
1.00
8719--8756
20
2.0
20
84
5
51
52
2
13
31
1.54

Tables:   1

The End!