Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005762.1 Corchorus capsularis cultivar CVL-1 contig05780, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11255

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3238--3275
19
1.9
19
89
5
58
50
7
13
28
1.69
5009--5047
12
3.6
12
80
19
50
25
28
15
30
1.96
6853--6883
13
2.5
12
94
5
53
25
22
16
35
1.94
7988--8024
16
2.3
16
100
0
74
35
8
0
56
1.29
8118--8190
33
2.2
34
80
11
89
19
10
16
53
1.72

Tables:   1

The End!