Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005768.1 Corchorus capsularis cultivar CVL-1 contig05786, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3372

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1300--1393
21
4.5
21
75
12
86
22
20
7
50
1.73
1312--1395
42
2.0
43
85
2
116
21
20
7
51
1.71
1312--1409
42
2.3
42
78
5
99
22
19
6
52
1.68
1375--1472
52
1.9
51
89
2
151
22
18
5
54
1.63
1829--2168
54
6.3
55
86
7
450
24
17
7
49
1.73
1932--2022
29
3.2
28
66
26
75
24
15
7
52
1.68

Tables:   1

The End!