Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005773.1 Corchorus capsularis cultivar CVL-1 contig05791, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23691

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--939
21
2.2
20
83
4
52
56
4
6
31
1.46
4994--5031
2
19.0
2
88
0
58
44
0
5
50
1.24
11980--12025
24
1.9
24
95
0
83
50
13
8
28
1.70
13843--13873
15
2.1
14
94
5
53
22
0
0
77
0.77
13916--13953
11
3.5
11
85
10
51
57
2
0
39
1.12
14150--14212
17
3.8
17
76
4
74
14
25
1
58
1.45
14174--14238
16
4.0
16
73
9
60
13
23
4
58
1.54
14153--14221
33
2.1
33
100
0
138
14
24
2
57
1.51
14300--14548
41
6.0
42
97
2
477
45
7
4
42
1.53
14300--14548
83
3.0
83
100
0
498
45
7
4
42
1.53
15642--15669
14
2.0
14
100
0
56
28
28
7
35
1.84
16838--16889
17
3.1
17
78
15
72
48
5
11
34
1.63
18914--19020
29
3.9
29
75
19
113
17
20
26
35
1.95

Tables:   1

The End!