Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005774.1 Corchorus capsularis cultivar CVL-1 contig05792, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2347

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156--207
25
2.0
26
89
10
81
26
17
11
44
1.83
160--469
135
2.4
126
81
11
349
27
16
5
50
1.68
340--447
30
3.5
29
73
18
101
29
13
5
50
1.64
186--469
64
4.2
64
83
10
338
27
16
5
50
1.67
2263--2287
12
2.1
12
100
0
50
8
0
24
68
1.16

Tables:   1

The End!