Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005799.1 Corchorus capsularis cultivar CVL-1 contig05817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13099

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6692--6730
20
2.0
20
89
0
60
43
20
10
25
1.83
6993--7018
2
13.0
2
100
0
52
50
0
0
50
1.00
8208--8256
25
2.1
23
81
11
55
48
16
4
30
1.64
8874--8922
25
2.0
25
100
0
98
26
8
32
32
1.86
10227--10273
11
4.3
11
81
7
51
72
0
25
2
0.96
10364--10414
24
2.2
22
86
6
66
47
0
0
52
1.00
10358--10420
29
2.2
29
88
2
92
47
1
0
50
1.10

Tables:   1

The End!