Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005821.1 Corchorus capsularis cultivar CVL-1 contig05839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9463

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3054--3090
15
2.4
16
86
8
51
48
16
21
13
1.80
4578--4615
19
2.0
19
100
0
76
26
31
21
21
1.98
6394--6501
22
4.9
22
73
6
85
37
11
11
39
1.76
6394--6500
44
2.4
44
82
3
126
37
11
11
40
1.77
6667--6704
19
2.0
20
85
15
53
63
2
5
28
1.30
6879--6945
31
2.1
32
81
10
84
46
4
16
32
1.67
6886--6951
31
2.1
32
86
5
91
46
4
19
28
1.69
9009--9044
18
1.9
19
88
5
56
50
8
36
5
1.56
9014--9056
19
2.3
18
84
4
50
51
6
32
9
1.61

Tables:   1

The End!