Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005823.1 Corchorus capsularis cultivar CVL-1 contig05841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12004

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2727--2788
32
2.0
31
84
15
83
54
4
11
29
1.56
7779--7808
15
2.0
15
100
0
60
0
26
13
60
1.34
9872--10315
167
2.7
166
85
3
597
38
15
15
30
1.88
11505--11566
16
3.9
15
75
8
52
30
38
17
12
1.88
11543--11605
16
3.9
16
81
4
65
36
34
15
12
1.86
11545--11630
23
3.7
23
74
11
68
36
34
18
10
1.85
11783--11819
14
2.7
14
87
4
58
67
0
13
18
1.23

Tables:   1

The End!