Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005830.1 Corchorus capsularis cultivar CVL-1 contig05848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8018

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--84
1
57.0
1
80
0
60
1
0
8
89
0.55
28--85
13
4.5
13
86
6
82
1
0
10
87
0.60
28--84
19
3.0
19
94
5
98
1
0
8
89
0.55
4897--5518
144
4.3
143
85
7
776
28
21
27
22
1.99
5285--5351
31
2.2
31
94
0
116
22
23
32
20
1.98
5285--5370
31
2.7
31
89
1
109
22
26
31
19
1.98
6212--6299
9
10.8
9
68
20
59
37
34
17
11
1.85
6205--6290
16
5.4
16
81
1
102
38
34
16
10
1.83
6204--6299
32
3.0
31
83
4
102
38
34
16
10
1.83
6742--6823
42
2.0
42
92
0
137
40
18
4
36
1.72
7048--7150
16
6.5
16
78
6
120
34
36
19
8
1.83
7002--7150
32
4.8
32
72
12
123
33
38
20
7
1.80

Tables:   1

The End!