Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005833.1 Corchorus capsularis cultivar CVL-1 contig05851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4560

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--246
41
4.4
42
84
7
239
40
18
14
26
1.89
303--487
41
4.5
41
79
5
169
40
16
16
26
1.89
1--486
260
1.9
258
85
3
672
42
18
13
25
1.87
751--3836
332
9.3
332
84
3
3772
32
15
17
35
1.90
509--3836
656
5.0
657
85
3
3927
32
14
16
35
1.90
3584--4085
251
2.0
249
92
0
842
30
14
17
36
1.91

Tables:   1

The End!