Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005838.1 Corchorus capsularis cultivar CVL-1 contig05856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4658

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2001--2238
22
10.8
22
74
11
141
40
10
14
34
1.81
2020--2084
21
2.8
24
86
11
91
43
9
13
33
1.76
2486--2556
25
2.9
25
83
4
92
38
5
16
39
1.73
2471--2549
25
3.4
23
76
8
70
41
5
13
39
1.67
2338--2590
22
11.6
22
68
15
96
41
7
14
35
1.75
2555--2595
22
2.0
21
85
9
57
36
9
14
39
1.79
2654--2717
22
2.9
22
76
4
58
34
9
18
37
1.83

Tables:   1

The End!