Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005859.1 Corchorus capsularis cultivar CVL-1 contig05877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13455

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
202--603
212
1.9
210
85
3
547
36
14
13
34
1.86
406--4522
646
6.4
636
82
6
3815
36
16
13
33
1.88
406--4141
321
11.6
317
78
7
3569
36
16
13
33
1.88
4779--5981
601
2.0
596
81
7
1385
36
15
13
34
1.87
5379--6856
311
4.5
327
75
11
1213
36
15
14
33
1.87
6865--8241
332
4.1
332
80
7
1481
37
15
14
33
1.88
9107--9132
13
2.0
13
100
0
52
61
0
15
23
1.33

Tables:   1

The End!