Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005866.1 Corchorus capsularis cultivar CVL-1 contig05884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3627

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225--442
33
6.6
32
76
13
149
30
19
15
33
1.93
435--1333
26
32.5
26
76
16
452
29
14
22
33
1.94
455--1333
58
15.9
54
81
12
777
29
14
22
33
1.93
503--1331
84
9.9
84
82
10
838
29
14
22
33
1.94
2785--3627
324
2.6
321
87
5
1180
35
16
13
34
1.88

Tables:   1

The End!