Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005874.1 Corchorus capsularis cultivar CVL-1 contig05892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4933

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
848--907
11
5.7
11
75
18
56
40
3
18
38
1.67
848--907
22
2.9
22
76
19
65
40
3
18
38
1.67
858--895
19
2.1
18
90
5
58
42
2
21
34
1.67
2245--2291
20
2.3
20
78
10
51
19
8
6
65
1.41
2533--2588
22
2.5
22
85
2
76
46
10
7
35
1.66
2532--2589
23
2.5
24
83
8
75
46
10
6
36
1.65
3645--3687
15
2.9
15
89
0
59
44
23
25
6
1.78

Tables:   1

The End!