Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005879.1 Corchorus capsularis cultivar CVL-1 contig05897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2566

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2104--2213
35
3.1
35
80
8
134
16
28
3
51
1.61
2190--2469
7
41.1
7
64
18
92
16
25
2
55
1.54
2200--2273
19
3.8
19
73
7
76
14
28
1
55
1.48
2177--2301
47
2.7
46
91
4
198
15
26
2
56
1.52
2101--2432
163
2.0
164
90
5
521
15
26
3
54
1.56
2259--2375
34
3.4
34
85
2
171
16
23
3
56
1.55
2247--2309
27
2.3
26
76
7
63
12
25
1
60
1.42
2329--2455
41
3.0
41
86
6
148
16
26
2
54
1.54
2388--2481
22
4.5
22
73
14
90
18
21
3
57
1.54
2328--2463
46
3.0
46
79
17
178
16
25
2
55
1.53
2388--2564
21
8.0
22
70
18
104
19
20
3
55
1.58
2449--2512
23
2.9
23
84
9
71
21
18
1
57
1.48

Tables:   1

The End!