Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005884.1 Corchorus capsularis cultivar CVL-1 contig05902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8532

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2444--2505
16
3.9
16
80
2
72
51
1
37
9
1.45
2933--3024
22
3.7
24
75
13
89
53
17
14
15
1.74
2923--3024
27
4.0
26
76
20
108
50
20
12
16
1.78
3274--3324
15
3.4
15
78
10
68
3
43
1
50
1.31
5159--5210
25
2.1
25
96
0
95
17
19
36
26
1.94
5480--5517
6
6.2
6
82
17
51
47
34
2
15
1.60
7879--8530
192
3.3
193
83
4
783
35
18
11
34
1.87

Tables:   1

The End!