Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005889.1 Corchorus capsularis cultivar CVL-1 contig05907, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1555

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--108
30
2.1
31
94
2
114
27
20
4
47
1.69
209--329
22
5.5
22
90
2
154
35
14
17
32
1.90
502--808
22
13.8
22
67
19
104
41
9
14
34
1.78
614--808
22
8.7
24
70
16
107
43
8
12
35
1.73
636--674
21
2.0
19
85
14
53
46
5
7
41
1.55
639--744
44
2.4
45
81
10
130
43
8
10
37
1.69
918--966
19
2.5
20
83
6
64
42
12
18
26
1.85
948--1250
22
13.8
21
70
13
139
40
8
13
37
1.76
954--1250
66
4.5
64
73
9
224
40
8
13
37
1.75
955--1212
44
5.9
44
73
10
154
41
8
12
37
1.74
1147--1211
23
2.8
23
78
0
76
41
6
12
40
1.67
946--1250
132
2.3
131
79
4
319
40
8
14
37
1.76

Tables:   1

The End!