Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005893.1 Corchorus capsularis cultivar CVL-1 contig05911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14849

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
282--356
27
2.7
27
89
2
123
44
24
14
17
1.86
1220--1246
2
13.5
2
100
0
54
48
0
0
51
1.00
1646--1674
13
2.1
14
93
6
51
17
0
6
75
1.01
12068--12175
39
2.8
39
91
0
162
18
24
15
41
1.89
13822--13868
2
23.0
2
95
4
85
48
2
0
48
1.13
14757--14785
11
2.7
11
94
5
51
55
13
0
31
1.39

Tables:   1

The End!