Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005894.1 Corchorus capsularis cultivar CVL-1 contig05912, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12299

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--67
15
2.1
15
93
6
53
66
0
0
33
0.92
449--497
16
3.1
15
80
8
62
20
10
32
36
1.86
442--514
32
2.3
32
85
0
92
17
8
32
41
1.79
672--710
16
2.4
16
95
0
69
5
15
17
61
1.51
666--747
32
2.6
31
78
5
85
9
12
20
57
1.63
1964--1991
2
14.0
2
100
0
56
50
0
0
50
1.00
2436--2460
12
2.1
12
100
0
50
68
16
8
8
1.38
4156--4188
2
17.0
2
87
6
50
45
0
3
51
1.16
6098--6138
21
2.0
21
90
0
64
31
24
12
31
1.92

Tables:   1

The End!