Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005899.1 Corchorus capsularis cultivar CVL-1 contig05917, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16587

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2277--2327
15
3.6
15
69
15
54
58
0
7
33
1.27
2365--2561
99
2.0
99
95
2
360
38
9
16
36
1.80
2738--2898
83
1.9
83
93
0
277
32
13
19
35
1.90
4582--4649
33
2.1
33
88
0
100
23
17
5
52
1.66
8249--8298
3
16.7
3
100
0
100
66
0
0
34
0.92

Tables:   1

The End!