Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005902.1 Corchorus capsularis cultivar CVL-1 contig05920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13498

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5063--5103
2
20.5
2
100
0
82
0
51
0
48
1.00
7652--7693
18
2.3
18
91
0
66
26
21
21
30
1.98
7737--9520
57
32.7
52
81
11
1674
28
15
23
32
1.95
7737--9520
26
65.3
26
82
10
1674
28
15
23
32
1.95
9497--9686
96
2.0
96
96
2
355
26
13
20
40
1.88
11263--11508
49
5.1
49
87
5
308
37
23
28
9
1.86
11263--11508
96
2.6
95
87
3
327
37
23
28
9
1.86
11524--13495
333
5.9
333
81
4
2291
32
16
17
34
1.92
11524--13495
669
3.0
667
94
1
3382
32
16
17
34
1.92

Tables:   1

The End!