Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005923.1 Corchorus capsularis cultivar CVL-1 contig05941, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13351

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3634--3677
21
2.1
21
83
8
54
18
31
9
40
1.81
3859--3948
33
2.7
34
84
6
114
16
38
33
11
1.84
3888--3973
33
2.6
33
83
0
109
13
36
37
12
1.84
9932--10025
45
2.1
45
98
2
181
48
4
10
36
1.57
11040--11077
16
2.4
16
91
4
60
50
0
2
47
1.15
12320--12537
88
2.5
89
89
0
339
34
11
16
38
1.84
12485--12594
57
1.9
57
92
0
184
33
11
20
34
1.89
12397--12682
145
2.0
145
95
0
509
35
11
15
38
1.83
12542--13169
88
7.1
88
90
0
977
35
11
14
38
1.82
12320--12770
233
1.9
234
88
0
688
35
11
15
37
1.84
12542--13169
176
3.6
177
95
0
1107
35
11
14
38
1.82

Tables:   1

The End!