Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005962.1 Corchorus capsularis cultivar CVL-1 contig05980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19109

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3921--3975
27
2.0
28
89
3
85
43
30
12
12
1.80
7575--7653
31
2.5
30
82
15
106
36
21
11
30
1.89
15399--15441
6
7.2
6
91
0
59
18
0
51
30
1.47
17274--17445
36
4.7
36
83
8
204
44
8
19
27
1.79
17252--17433
37
4.9
35
83
7
186
44
8
19
26
1.80
17252--17445
73
2.6
72
81
8
230
44
8
20
27
1.79
17444--17546
41
2.5
41
96
0
188
48
13
18
19
1.81
17643--17938
37
8.4
37
78
12
309
40
9
25
25
1.85
17750--17808
18
3.2
18
65
21
50
40
10
27
22
1.85
17926--18146
73
3.0
74
84
7
245
43
7
21
27
1.79
17929--18155
37
6.2
36
81
8
237
43
7
20
28
1.79
18067--18182
36
3.2
36
69
15
103
54
8
12
24
1.66
18032--18184
73
2.1
73
96
1
281
51
7
15
25
1.69

Tables:   1

The End!