Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005964.1 Corchorus capsularis cultivar CVL-1 contig05982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33495

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3312--3342
2
15.5
2
100
0
62
48
51
0
0
1.00
13808--13878
36
2.0
35
94
2
124
47
4
12
35
1.61
13820--13897
36
2.2
36
81
4
86
48
7
8
34
1.63
14432--14465
15
2.3
15
89
0
50
82
0
5
11
0.83
15164--15217
27
2.0
27
96
0
99
24
22
12
40
1.89
16894--17023
45
2.9
45
97
0
242
50
16
19
13
1.77
18292--18522
119
1.9
119
93
0
399
35
24
14
25
1.93
30119--30216
42
2.4
41
86
6
128
9
28
34
27
1.88
31886--31978
33
2.8
33
87
6
118
8
23
46
21
1.79
31924--32028
33
3.2
32
86
5
138
8
29
41
20
1.81

Tables:   1

The End!