Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005966.1 Corchorus capsularis cultivar CVL-1 contig05984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12517

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2464--2504
21
2.0
21
95
0
73
46
14
26
12
1.80
2466--2512
21
2.2
21
84
0
58
51
12
27
8
1.69
10567--11133
35
16.2
35
91
1
825
29
15
21
33
1.94
11071--11405
35
9.6
35
89
1
487
26
18
17
36
1.94
11046--11405
69
5.2
70
88
2
494
27
18
17
36
1.94
11046--11405
104
3.5
105
90
1
530
27
18
17
36
1.94
11859--11891
2
16.5
2
100
0
66
51
0
48
0
1.00

Tables:   1

The End!