Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005974.1 Corchorus capsularis cultivar CVL-1 contig05992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4298

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1424--1529
33
3.2
33
80
6
99
8
25
44
21
1.80
1480--1562
33
2.5
33
84
3
105
12
28
37
21
1.89
1542--1583
21
2.0
21
85
0
57
19
30
28
21
1.97
1845--1874
6
5.0
6
100
0
60
50
16
0
33
1.46
1871--1901
13
2.4
13
100
0
62
61
6
9
22
1.50
2817--2842
10
2.6
10
100
0
52
23
7
19
50
1.73

Tables:   1

The End!