Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005983.1 Corchorus capsularis cultivar CVL-1 contig06001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12561

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2610--2662
25
2.1
25
96
0
97
30
22
15
32
1.94
4833--4866
17
1.9
18
94
5
61
58
0
41
0
0.98
5046--5098
8
6.9
8
75
16
58
24
0
26
49
1.51
5037--5096
30
2.0
30
100
0
120
23
0
26
50
1.50
6490--6547
29
2.0
29
100
0
116
65
13
6
13
1.45
10307--10337
3
10.3
3
100
0
62
67
0
0
32
0.91
11188--11230
2
21.5
2
90
0
68
48
2
0
48
1.14
11811--11846
4
9.2
4
87
6
56
75
0
25
0
0.81

Tables:   1

The End!