Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005991.1 Corchorus capsularis cultivar CVL-1 contig06009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5862

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1712--1746
17
2.1
17
88
0
52
25
8
25
40
1.84
2107--2204
32
3.2
32
60
14
78
47
22
2
27
1.62
2091--2209
61
2.0
61
100
0
238
48
20
2
28
1.62
5371--5428
27
2.1
27
83
0
71
22
34
3
39
1.71
5384--5437
27
2.0
27
96
0
99
22
35
3
38
1.72

Tables:   1

The End!