Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005999.1 Corchorus capsularis cultivar CVL-1 contig06017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11490

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--46
10
4.8
9
83
13
54
43
0
2
54
1.12
10--48
2
21.5
2
80
19
50
43
0
0
56
0.99
2054--2083
15
2.0
15
100
0
60
26
20
6
46
1.75
4144--4182
6
6.5
6
100
0
78
30
0
15
53
1.42
10344--10368
10
2.5
10
100
0
50
48
20
8
24
1.76
11278--11323
12
3.8
12
88
2
65
21
8
8
60
1.53
11320--11346
6
4.5
6
100
0
54
29
0
14
55
1.40

Tables:   1

The End!