Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006000.1 Corchorus capsularis cultivar CVL-1 contig06018, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19071

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2311--2356
24
1.9
24
95
0
83
41
23
28
6
1.79
2341--2614
106
2.6
106
91
0
442
34
20
20
24
1.96
2744--2789
24
1.9
24
95
0
83
41
23
28
6
1.79
3148--3185
19
2.0
19
90
10
60
26
42
15
15
1.87
3105--3366
119
2.2
119
95
0
470
32
27
24
15
1.95
5129--5170
19
2.3
18
84
8
57
61
0
2
35
1.09
5404--5575
86
2.0
86
100
0
344
27
15
12
44
1.83
5780--5813
12
2.9
12
91
4
52
82
0
2
14
0.79
9029--9199
88
1.9
88
97
0
324
26
12
14
46
1.80

Tables:   1

The End!