Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006002.1 Corchorus capsularis cultivar CVL-1 contig06020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14408

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4630--4679
22
2.2
22
82
10
57
40
16
10
34
1.81
4637--4704
22
3.1
22
79
12
77
39
14
10
35
1.80
4646--4726
22
3.7
21
79
15
76
35
9
12
41
1.76
6544--6570
5
5.4
5
100
0
54
59
0
18
22
1.38
11435--11465
12
2.6
12
94
0
53
0
12
32
54
1.38
11679--11704
12
2.2
12
100
0
52
50
0
0
50
1.00
11871--11953
42
2.0
43
90
7
134
34
22
18
24
1.96
13330--13377
23
2.1
23
100
0
96
20
25
22
31
1.98

Tables:   1

The End!