Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006008.1 Corchorus capsularis cultivar CVL-1 contig06026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6183

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
371--416
5
9.4
5
81
13
51
0
23
0
76
0.79
371--416
19
2.3
20
88
3
67
0
23
0
76
0.79
798--839
12
3.4
12
75
18
50
40
16
2
40
1.62
803--851
14
3.8
13
76
17
57
40
20
2
36
1.64
798--856
25
2.4
25
97
0
109
42
16
3
37
1.66
866--935
17
3.7
17
72
26
52
1
18
2
77
0.97
868--953
11
7.5
11
73
17
59
2
19
2
75
1.02
868--953
14
5.8
15
75
15
65
2
19
2
75
1.02
879--952
15
4.9
15
77
12
57
2
21
1
74
1.02

Tables:   1

The End!