Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006010.1 Corchorus capsularis cultivar CVL-1 contig06028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6666

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1951--2075
21
5.8
21
75
16
105
21
16
6
55
1.64
2051--2106
15
3.9
15
74
9
62
16
21
5
57
1.59
2087--2173
21
4.1
21
79
8
88
20
21
8
49
1.74
2018--2172
73
2.2
73
81
9
176
18
21
7
52
1.69
2281--2437
35
4.4
34
75
11
136
18
21
4
56
1.59
2276--2433
72
2.2
71
80
7
169
17
20
5
56
1.60
2644--2805
47
3.4
47
91
0
252
22
21
8
46
1.78
3475--3969
51
9.8
49
77
5
402
36
16
4
42
1.69
3525--3969
101
4.4
101
91
2
646
36
16
4
42
1.67
6004--6037
16
2.1
16
88
0
50
8
20
11
58
1.59

Tables:   1

The End!