Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006013.1 Corchorus capsularis cultivar CVL-1 contig06031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16423

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--38
2
18.5
2
100
0
74
48
0
0
51
1.00
686--743
10
5.9
10
71
18
50
29
1
13
55
1.49
686--799
39
2.9
39
83
7
151
28
4
14
52
1.60
7703--7742
2
21.0
2
85
10
57
52
0
0
47
1.00
8046--8087
21
2.0
21
100
0
84
28
19
14
38
1.90
14037--14061
7
3.6
7
100
0
50
28
44
0
28
1.55

Tables:   1

The End!