Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006014.1 Corchorus capsularis cultivar CVL-1 contig06032, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27484

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1088--1143
17
3.4
17
68
26
57
26
5
0
67
1.11
1088--1165
32
2.4
34
91
6
133
24
5
0
70
1.07
9680--9826
73
2.0
74
95
1
269
29
8
4
57
1.48
10809--10999
95
2.0
95
97
0
364
18
29
18
33
1.95
16821--16874
27
2.0
27
96
0
99
27
18
24
29
1.98
19946--20004
9
7.1
9
83
11
56
16
22
3
57
1.54
20008--20085
33
2.4
33
86
0
111
16
42
28
12
1.85
20399--20443
21
2.1
22
87
4
65
35
8
35
20
1.84
23251--23331
29
2.8
29
100
0
162
38
20
14
25
1.92

Tables:   1

The End!