Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006022.1 Corchorus capsularis cultivar CVL-1 contig06040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12102

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1499--1525
3
9.0
3
100
0
54
66
0
0
33
0.92
8285--8322
19
2.0
19
100
0
76
21
10
21
47
1.80
9947--10020
28
2.6
29
95
4
132
50
24
0
25
1.50
10908--10947
7
5.4
7
90
3
53
0
27
0
72
0.85
10919--10947
4
7.5
4
92
7
51
0
24
0
75
0.80
11356--11385
6
5.0
6
100
0
60
83
0
0
16
0.65
11702--11736
2
18.0
2
94
5
63
48
0
0
51
1.00

Tables:   1

The End!