Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006023.1 Corchorus capsularis cultivar CVL-1 contig06041, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51249

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3643--3714
29
2.4
30
77
13
103
43
11
22
23
1.85
27881--27930
25
2.0
25
96
0
91
42
8
18
32
1.79
30344--30371
2
14.0
2
100
0
56
50
0
0
50
1.00
39431--39475
2
23.0
2
86
4
65
44
0
4
51
1.21
39434--39476
21
2.0
21
90
0
68
41
0
4
53
1.21
42632--42678
23
2.0
23
100
0
94
38
8
12
40
1.74
50280--50305
12
2.2
12
100
0
52
50
0
34
15
1.45

Tables:   1

The End!