Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006026.1 Corchorus capsularis cultivar CVL-1 contig06044, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8949

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1474--1591
59
2.0
59
94
0
209
48
6
20
24
1.74
1873--1984
36
3.4
36
70
27
120
28
23
13
34
1.92
1870--2108
62
3.9
62
96
0
415
28
23
12
35
1.91
2060--2144
36
2.4
36
91
0
134
29
21
11
37
1.89
1998--2246
98
2.5
98
92
0
408
30
22
11
36
1.89
2157--2242
36
2.4
36
98
0
163
33
19
11
34
1.88

Tables:   1

The End!