Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006027.1 Corchorus capsularis cultivar CVL-1 contig06045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28354

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7019--7044
2
13.0
2
100
0
52
50
0
0
50
1.00
19884--19930
20
2.3
21
85
7
69
53
14
4
27
1.60
21171--21213
2
20.5
2
86
9
59
46
2
4
46
1.36
21414--21518
38
2.8
37
82
4
138
14
19
12
54
1.71
21576--21717
22
6.6
22
75
8
105
42
11
14
31
1.80
21838--21896
22
2.8
21
82
12
68
38
10
10
40
1.73
21947--22247
22
13.6
22
70
9
119
34
10
17
37
1.84
21947--22251
45
6.9
44
72
11
171
34
10
17
37
1.84
21947--22340
22
17.9
22
69
12
116
36
10
16
36
1.83
22307--22459
62
2.5
62
91
0
252
44
9
13
32
1.76
26460--26487
2
14.0
2
100
0
56
50
0
0
50
1.00
26502--26546
13
3.5
13
78
6
56
22
0
6
71
1.09
27428--27452
12
2.1
12
100
0
50
60
8
8
24
1.52

Tables:   1

The End!