Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006028.1 Corchorus capsularis cultivar CVL-1 contig06046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16947

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--312
15
2.3
15
89
0
50
14
14
35
35
1.87
2625--2695
9
8.2
9
71
12
51
22
36
5
35
1.78
2625--2695
18
4.1
18
72
17
69
22
36
5
35
1.78
2620--2682
33
1.9
33
93
0
108
23
38
3
34
1.71
3281--3419
58
2.3
60
86
4
210
51
23
2
22
1.61
3823--3893
9
8.2
9
71
12
51
22
36
5
35
1.78
3823--3893
18
4.1
18
72
17
69
22
36
5
35
1.78
3818--3880
33
1.9
33
93
0
108
23
38
3
34
1.71
4481--4620
57
2.4
56
85
7
190
51
22
2
22
1.61
7099--7185
41
2.1
42
89
2
131
28
10
21
39
1.86
7180--7219
13
3.1
13
81
0
53
30
7
42
20
1.79
12221--12259
19
2.1
19
90
4
62
12
48
5
33
1.63
16015--16049
2
18.0
2
94
5
63
48
0
0
51
1.00

Tables:   1

The End!