Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006029.1 Corchorus capsularis cultivar CVL-1 contig06047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21258

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1108--1139
12
2.4
14
90
10
50
46
3
9
40
1.52
3537--3621
41
2.0
41
86
6
116
16
16
5
61
1.53
5793--5826
16
2.1
17
88
5
52
47
0
0
52
1.00
5787--5847
22
3.0
20
77
17
63
45
1
0
52
1.10
10533--10563
1
31.0
1
100
0
62
0
0
0
100
0.00
11934--11983
26
1.9
26
95
0
91
38
4
20
38
1.71
13153--13200
6
8.3
6
86
9
64
0
4
16
79
0.89
13153--13200
11
4.2
12
83
5
64
0
4
16
79
0.89
15822--15848
1
27.0
1
100
0
54
0
0
0
100
0.00
16560--16616
30
1.9
30
88
0
87
36
14
19
29
1.91
18883--19020
36
3.8
35
85
5
161
18
50
8
22
1.74
18882--19031
72
2.1
72
82
2
185
18
50
9
22
1.75
18980--19203
45
5.0
45
92
0
349
15
50
9
24
1.74
20010--20034
12
2.1
12
100
0
50
16
0
20
64
1.30

Tables:   1

The End!