Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006033.1 Corchorus capsularis cultivar CVL-1 contig06051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20065

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1301--1360
2
29.0
2
86
6
84
48
1
3
46
1.28
2984--3011
5
5.6
5
100
0
56
57
0
0
42
0.99
6302--6367
32
2.1
32
100
0
132
18
15
18
48
1.81
6395--6445
16
3.2
16
88
5
77
0
13
0
86
0.58
6400--6442
12
3.6
11
85
14
59
0
13
0
86
0.58
6396--6445
20
2.6
19
84
12
66
0
14
0
86
0.58
15680--15743
29
2.1
31
88
5
96
31
18
1
48
1.58
16203--16347
22
6.6
22
72
10
100
40
11
11
36
1.77
16345--16396
22
2.4
21
80
6
59
36
13
19
30
1.90
16378--16419
22
1.9
22
90
0
66
35
11
14
38
1.83
16521--16591
22
3.2
21
71
15
56
33
8
19
38
1.82

Tables:   1

The End!